Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold5
Parameters: 2 7 7 80 10 50 1000
Length:  400853

Tables:   1   2   

This is table  2  of  2  ( 132 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
346930--346979
20
2.5
19
84
9
64
12
28
42
18
1.85
348723--348756
12
2.9
12
91
4
52
0
23
0
76
0.79
364709--364746
20
1.9
20
88
0
58
44
2
13
39
1.57
368564--368600
12
2.9
13
88
8
58
0
0
10
89
0.49
378952--379019
33
2.1
33
100
0
136
30
20
33
14
1.93
379406--379492
40
2.2
40
91
4
140
54
10
13
21
1.69
382537--382594
30
1.9
31
89
10
93
60
12
1
25
1.41
383089--383146
25
2.3
25
87
0
89
17
18
18
44
1.87
386536--386605
20
3.3
20
66
14
59
34
12
14
38
1.84
386518--386605
44
2.0
44
100
0
176
34
13
15
36
1.87
395593--395739
79
1.9
79
95
0
267
25
12
18
43
1.85
399762--399821
32
1.9
30
86
3
75
36
5
15
43
1.68

Tables:   1   2

The End!