Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3222
Parameters: 2 7 7 80 10 50 1000
Length:  44881

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1808--2061
40
6.5
39
80
10
243
26
21
27
24
1.99
1808--2026
79
2.8
78
84
6
257
26
21
27
25
1.99
1888--2061
76
2.3
78
83
6
203
25
21
28
24
1.99
9709--9930
40
5.7
40
81
8
233
25
21
27
25
1.99
9709--9930
79
2.8
78
81
7
245
25
21
27
25
1.99
9789--9963
77
2.3
78
81
6
187
25
22
28
24
1.99
13423--13504
34
2.4
34
87
0
110
26
23
26
23
2.00
15993--16046
27
2.0
27
96
0
99
33
20
3
42
1.70
22259--22379
18
6.7
18
88
0
179
39
13
22
24
1.90
22280--22343
12
5.3
13
68
22
50
39
14
23
23
1.91
22259--22379
36
3.4
36
94
0
206
39
13
22
24
1.90
22699--22979
27
10.6
26
81
7
282
38
21
15
24
1.92
22694--22979
79
3.6
79
85
5
344
38
21
15
24
1.92
22693--22979
54
5.4
53
82
6
339
38
21
15
25
1.92
30723--30875
28
5.5
28
92
2
238
26
13
27
32
1.93
30698--30875
84
2.1
83
88
3
259
26
12
27
33
1.93

Tables:   1

The End!