Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1572
Parameters: 2 7 7 80 10 50 1000
Length:  42964

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6100--6272
46
3.8
46
80
4
188
30
28
20
21
1.98
6107--6278
91
1.9
92
88
1
265
29
27
20
22
1.98
9381--9559
27
6.6
27
83
3
207
27
15
27
29
1.96
9382--9537
82
1.9
81
88
3
233
26
15
28
29
1.96
9378--9559
82
2.2
81
83
2
231
27
15
27
29
1.96
14347--14404
18
3.2
18
81
11
64
31
1
15
51
1.53
14349--14402
19
2.9
19
83
2
56
31
1
16
50
1.56
16008--16043
10
3.6
10
92
7
56
38
11
16
33
1.84
16014--16078
11
6.1
11
72
12
55
38
13
15
32
1.87
16014--16070
21
2.7
21
83
8
71
38
14
15
31
1.87
16710--16744
18
1.9
18
94
0
61
37
22
8
31
1.85
23746--23812
10
6.6
10
83
6
82
37
10
19
32
1.86
23746--23812
21
3.3
21
89
4
93
37
10
19
32
1.86
23752--23824
32
2.3
31
83
2
83
36
12
17
32
1.87
26409--26625
45
4.9
45
88
3
300
27
27
20
24
1.99
29048--29090
22
2.0
22
85
0
59
53
6
16
23
1.67
29658--29797
45
3.1
45
82
4
149
43
15
19
21
1.88
31174--31217
21
2.1
21
91
0
70
27
0
25
47
1.52
33667--33834
46
3.7
44
77
11
176
22
20
27
29
1.98
33669--33842
45
3.8
45
77
9
172
21
20
28
29
1.98
41197--41372
46
3.8
46
79
12
216
20
21
29
28
1.98
41194--41365
93
1.8
93
96
0
317
20
21
29
27
1.98

Tables:   1

The End!