Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold958
Parameters: 2 7 7 80 10 50 1000
Length:  47982

Tables:   1   

This is table  1  of  1  ( 36 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20609--20647
18
2.2
18
100
0
78
25
0
15
58
1.37
20852--20930
9
8.3
9
76
18
72
3
17
2
75
1.06
20849--20929
13
6.2
13
72
15
60
3
18
2
75
1.07
20852--20940
19
4.6
17
76
20
79
3
16
3
76
1.06
20863--20930
29
2.4
29
87
2
102
4
17
2
75
1.10
20870--20934
29
2.2
29
91
0
103
4
16
3
75
1.10
20833--20940
10
11.1
9
73
14
72
3
17
3
75
1.10
22117--22146
8
3.8
8
95
0
51
53
0
10
36
1.35
22948--23066
41
3.0
40
75
3
107
15
18
28
37
1.91
22992--23088
41
2.4
41
80
0
104
16
22
25
35
1.95
28665--28704
16
2.3
18
87
8
57
32
2
5
60
1.32
31204--31267
31
2.1
31
88
8
96
57
10
4
26
1.52
33186--33288
37
2.8
37
95
0
179
25
31
20
23
1.98
33407--33509
48
2.2
47
84
5
136
30
30
7
32
1.86
33419--33526
48
2.2
48
91
0
171
32
27
5
34
1.80
33506--33549
23
1.9
23
100
0
88
34
22
9
34
1.86
33458--33597
71
2.0
71
97
0
262
32
25
7
35
1.83
33429--33643
119
1.8
117
95
2
394
31
26
6
35
1.82
33529--33739
48
4.4
48
95
2
372
31
27
6
34
1.83
33529--33739
94
2.2
95
94
1
370
31
27
6
34
1.83
37268--37424
28
5.5
28
75
6
145
30
29
18
21
1.97
37295--37396
29
3.6
29
80
7
118
29
31
16
22
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
37268--37428
57
2.8
57
91
0
241
30
29
18
21
1.97
37456--37737
39
7.3
40
91
7
467
26
29
20
24
1.99
37456--37737
79
3.7
79
92
5
472
26
29
20
24
1.99
39023--39125
37
2.8
37
96
0
188
24
32
20
23
1.98
39266--39648
48
8.0
48
94
1
673
30
28
6
34
1.83
39272--39639
189
1.9
191
97
1
704
30
28
6
33
1.83
43104--43261
28
5.5
28
73
7
129
30
29
18
21
1.97
43097--43265
57
2.9
57
87
0
230
30
28
18
22
1.97
43270--43585
38
8.8
36
75
18
218
27
26
21
24
1.99
43306--43589
72
4.0
73
80
17
305
27
26
21
24
1.99
43294--43568
34
7.7
36
76
19
251
28
26
20
24
1.99
44809--44905
36
2.8
35
81
9
110
26
30
18
23
1.98
45019--45283
46
5.8
45
84
12
314
32
30
4
32
1.79
45033--45283
135
1.9
134
88
9
386
31
29
5
33
1.79

Tables:   1

The End!