Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2096
Parameters: 2 7 7 80 10 50 1000
Length:  42380

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
58--116
29
2.0
29
100
0
118
33
27
13
25
1.93
1398--1620
40
5.7
40
83
6
240
25
27
21
25
1.99
1398--1620
79
2.8
78
81
5
252
25
27
21
25
1.99
1552--1629
40
1.9
41
82
10
97
26
28
20
24
1.99
9301--9524
40
5.7
40
82
7
233
25
28
20
25
1.99
9301--9525
79
2.8
78
80
6
247
25
28
20
25
1.99
9456--9533
40
1.9
41
82
10
97
26
28
20
24
1.99
11222--11315
33
2.8
33
96
0
170
51
15
14
18
1.77
20542--20662
47
2.6
47
93
1
199
34
14
24
26
1.93
20642--20835
55
3.6
55
83
4
225
36
15
25
22
1.94
23211--23397
49
3.8
49
78
3
196
29
24
17
27
1.97
23216--23398
100
1.8
99
91
1
303
30
25
18
26
1.98
25816--25880
15
4.4
15
76
16
64
63
13
12
10
1.53
25826--25885
30
2.0
30
84
12
79
61
16
10
11
1.55
28876--29015
51
2.8
49
78
5
156
28
25
20
26
1.99
31275--31299
13
1.9
13
100
0
50
16
0
16
68
1.22
31256--31299
22
2.0
21
86
4
61
20
0
20
59
1.39
31400--31481
24
3.6
23
77
15
80
39
12
14
34
1.84
31395--31461
21
3.0
21
81
16
82
35
11
17
34
1.87
31395--31481
45
1.9
45
88
0
129
36
12
16
34
1.86
32763--32791
13
2.2
13
100
0
58
93
6
0
0
0.36

Tables:   1

The End!