Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1749
Parameters: 2 7 7 80 10 50 1000
Length:  50223

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
846--912
26
2.7
25
86
8
93
85
1
0
13
0.68
846--899
1
54.0
1
81
0
54
88
1
0
9
0.58
981--1025
20
2.3
20
84
3
56
82
8
2
6
0.93
1020--1081
32
1.9
32
83
3
79
77
4
8
9
1.12
1607--1956
1
350.0
1
90
0
538
94
2
0
2
0.36
2673--2711
15
2.6
14
81
14
51
87
5
0
7
0.68
4116--4148
10
3.4
10
83
8
50
87
9
0
3
0.63
4115--4170
24
2.3
24
84
0
76
83
8
0
7
0.80
4114--4176
24
2.5
25
76
7
74
82
9
0
7
0.84
4113--4148
9
4.0
9
89
10
56
88
8
0
2
0.59
6510--6572
1
63.0
1
96
0
117
98
1
0
0
0.12
12160--12301
1
142.0
1
87
0
203
93
2
1
2
0.44
17992--18042
20
2.6
19
78
9
57
50
11
5
31
1.62
20365--20403
19
2.0
20
95
5
71
10
25
17
46
1.80
20364--20402
11
3.9
10
83
10
53
10
23
17
48
1.78
20407--20446
20
2.0
20
90
0
62
27
27
12
32
1.93
21898--21922
12
2.1
12
100
0
50
44
16
8
32
1.76
26987--27249
40
6.6
40
87
3
316
24
20
28
26
1.99
27026--27284
80
3.3
80
84
3
238
25
20
28
25
1.99
34498--34760
40
6.6
40
87
3
316
24
20
28
26
1.99
34537--34795
80
3.3
80
84
3
238
25
20
28
25
1.99
39304--39528
46
4.9
45
72
16
158
29
19
27
23
1.98

Tables:   1

The End!