Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1981
Parameters: 2 7 7 80 10 50 1000
Length:  49918

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10279--10399
37
3.3
37
98
0
233
23
33
19
23
1.97
10612--11000
47
8.1
47
86
5
526
26
29
12
31
1.93
10612--11000
94
4.0
98
90
5
596
26
29
12
31
1.93
16648--16696
25
2.0
25
84
7
66
42
12
24
20
1.86
18410--18448
19
2.2
17
86
9
51
46
2
7
43
1.46
20703--20784
6
13.7
6
79
5
76
70
0
18
10
1.15
20702--20777
12
6.2
12
81
1
89
72
0
18
9
1.10
20707--20786
18
4.4
18
88
0
115
68
0
20
11
1.19
42642--43285
47
13.6
47
93
2
1056
32
8
29
29
1.86
42642--43285
96
6.8
94
92
3
1056
32
8
29
29
1.86
42642--43285
143
4.5
143
95
1
1114
32
8
29
29
1.86
45493--45819
40
8.2
40
88
2
460
24
22
27
25
2.00
49353--49851
49
10.6
47
92
3
790
32
8
29
29
1.87
49353--49851
142
3.5
143
92
3
812
32
8
29
29
1.87

Tables:   1

The End!