Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3086
Parameters: 2 7 7 80 10 50 1000
Length:  53639

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13176--13981
83
9.8
82
73
16
579
16
29
34
19
1.94
13176--13981
40
19.6
40
70
19
274
16
29
34
19
1.94
17279--17429
42
3.6
42
83
2
187
18
34
30
16
1.93
17899--18067
42
4.0
42
86
5
232
17
30
33
17
1.94
17899--18060
85
1.9
85
87
2
236
16
30
34
18
1.93
23460--23510
24
2.1
24
92
0
84
9
39
33
17
1.83
23605--24359
43
17.8
42
86
4
935
14
28
36
20
1.92
23609--24359
84
8.9
84
87
3
1008
14
28
35
20
1.92
31454--31598
42
3.4
42
88
0
209
17
33
31
17
1.94
32068--32236
42
4.0
41
82
6
178
18
30
32
17
1.95
32068--32229
85
1.9
85
84
5
220
17
30
33
18
1.94
38668--38836
42
4.0
42
83
6
216
17
28
34
19
1.94
38668--38827
85
1.9
85
89
2
250
16
28
35
20
1.94
39046--39124
24
3.3
24
78
3
88
12
39
29
18
1.88
39225--39672
43
10.5
43
84
4
550
13
28
37
20
1.91
39218--39672
85
5.3
85
84
2
576
13
28
37
20
1.91
46456--46565
45
2.4
44
81
12
134
16
30
32
20
1.94

Tables:   1

The End!