Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1066
Parameters: 2 7 7 80 10 50 1000
Length:  45831

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3794--3840
20
2.3
20
81
0
58
29
34
12
23
1.92
13559--13613
20
2.8
20
82
0
65
23
21
18
36
1.95
13577--13622
20
2.3
20
96
0
83
19
17
21
41
1.90
16489--16547
17
3.6
17
88
9
95
22
11
5
61
1.50
16489--16543
15
3.5
15
90
5
83
21
10
5
61
1.49
16585--16633
12
4.2
12
92
5
82
20
0
8
71
1.11
16586--16632
23
2.0
23
95
0
85
17
0
8
74
1.05
19510--19633
56
2.3
54
78
4
142
23
24
16
36
1.94
22120--22189
21
3.3
21
77
2
77
10
24
0
65
1.23
22118--22208
42
2.2
42
80
13
107
8
25
1
64
1.29
22230--22277
15
3.3
14
80
8
60
4
18
0
77
0.93
22230--22272
21
2.0
21
90
0
68
4
18
0
76
0.95
22242--22288
21
2.2
22
85
7
62
8
25
0
65
1.20
23164--23215
11
4.6
12
90
9
83
13
5
5
75
1.18
23164--23220
23
2.5
22
91
2
87
17
7
5
70
1.29
25472--25595
56
2.3
54
80
4
151
22
23
16
37
1.93
26066--26098
14
2.4
14
100
0
66
45
18
6
30
1.73
26567--26633
31
2.1
32
81
13
77
26
11
29
31
1.92
27422--27465
22
2.0
22
90
0
70
27
36
2
34
1.70
30420--30453
17
2.0
17
94
0
59
17
20
17
44
1.87
32348--32416
23
2.8
25
72
16
63
69
1
17
11
1.25
32462--32524
33
1.9
33
84
12
85
53
6
26
12
1.62
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
36767--36819
23
2.4
22
76
20
56
11
18
0
69
1.17
36763--36866
18
5.8
17
67
17
52
9
23
0
66
1.27
39052--39117
21
3.0
22
86
4
80
30
4
30
34
1.78
43321--43372
20
2.5
20
81
9
61
3
19
3
73
1.15
43303--43358
20
3.2
18
74
18
55
7
16
3
73
1.20

Tables:   1

The End!