Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1161_ERROPOS194588
Parameters: 2 7 7 80 10 50 1000
Length:  99999

Tables:   1   

This is table  1  of  1  ( 39 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9541--9598
20
2.8
20
84
5
71
39
22
27
10
1.86
10233--10292
30
2.0
30
100
0
120
26
10
20
43
1.83
10577--10601
12
2.1
12
100
0
50
28
0
24
48
1.52
12547--23433
623
17.5
624
98
0
20625
34
18
9
37
1.84
23781--27959
569
7.0
569
79
14
2879
34
17
9
37
1.84
24350--28306
616
6.5
619
92
5
6522
34
18
10
37
1.84
30674--30880
89
2.3
89
94
0
369
26
23
21
28
1.99
30632--30882
44
5.6
45
75
11
196
25
23
21
29
1.99
32021--32227
87
2.4
87
90
4
319
26
23
20
28
1.99
32022--32229
44
4.7
43
72
16
142
25
24
20
29
1.99
32259--32376
44
2.6
45
75
18
120
27
25
19
27
1.99
32108--32393
147
2.0
146
88
3
432
27
24
19
28
1.99
32396--32503
43
2.5
43
83
1
126
34
21
17
26
1.96
45903--48641
624
4.4
624
95
0
4777
34
17
9
38
1.83
49757--49799
15
2.9
15
75
0
50
20
23
2
53
1.57
53316--53374
10
5.9
10
78
11
50
13
1
5
79
0.97
53306--53399
22
4.3
22
70
22
72
18
1
6
74
1.09
53315--53407
6
15.7
6
70
21
63
16
1
5
77
1.01
53306--53367
28
2.2
28
82
5
72
16
1
6
75
1.08
53324--53401
27
2.9
27
84
9
88
16
1
5
76
1.02
53323--53401
28
2.9
28
81
10
83
16
1
5
77
1.01
53291--53407
33
3.6
32
70
19
98
17
1
5
74
1.11
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
61517--61569
27
2.0
27
84
0
70
16
9
3
69
1.30
61515--61569
22
2.5
22
76
5
58
20
9
3
67
1.34
63385--63469
27
3.1
27
78
8
75
23
17
18
40
1.92
63781--63815
16
2.2
16
89
0
52
17
2
2
77
1.02
63982--64006
3
8.3
3
100
0
50
68
0
0
32
0.90
65000--65076
15
5.3
14
74
21
61
35
2
6
55
1.39
66563--66605
12
3.6
12
75
12
52
23
44
0
32
1.54
71610--71733
63
2.0
64
88
1
187
30
18
5
45
1.73
85415--85479
27
2.4
27
97
0
121
61
13
4
20
1.50
85958--86001
19
2.3
19
88
0
61
68
2
0
29
1.02
92249--92311
29
2.2
28
82
5
72
28
12
15
42
1.84
92507--92589
22
3.8
22
82
6
114
31
25
0
43
1.55
92505--92596
44
2.1
44
87
4
132
30
26
0
43
1.55
92598--92639
22
1.9
22
90
0
66
33
33
0
33
1.58
92681--92737
28
2.0
30
89
6
91
38
0
1
59
1.08
92836--92869
15
2.3
15
90
5
52
26
0
5
67
1.13
97522--97604
31
2.6
31
80
1
94
16
30
14
38
1.89

Tables:   1

The End!