Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1636
Parameters: 2 7 7 80 10 50 1000
Length:  65327

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2425--2479
20
2.8
20
85
0
74
25
29
18
27
1.98
10598--10632
12
2.9
12
95
0
61
71
5
5
17
1.25
10683--10720
16
2.4
16
82
8
51
84
0
10
5
0.77
12436--12474
15
2.4
15
87
12
51
66
2
20
10
1.33
13954--14008
20
2.8
20
88
0
83
25
29
16
29
1.97
17383--17435
11
4.6
12
80
13
58
77
5
1
15
1.04
17383--17435
23
2.3
23
86
0
70
77
5
1
15
1.04
17383--17435
12
4.6
11
77
13
54
77
5
1
15
1.04
17475--17546
16
5.2
13
73
17
56
75
1
13
9
1.12
17475--17528
13
3.9
14
73
17
51
75
1
12
9
1.11
18379--18416
16
2.4
15
91
8
58
68
0
21
10
1.19
19896--19950
20
2.8
20
88
0
83
25
29
16
29
1.97
23324--23379
13
4.5
13
80
12
64
78
5
3
12
1.05
23424--23493
30
2.3
30
92
4
115
74
2
12
10
1.18
30629--30681
15
3.4
15
94
5
88
20
11
5
62
1.49
30726--30779
11
5.0
11
88
4
83
18
0
9
72
1.11
30727--30779
21
2.5
22
90
3
90
18
0
9
71
1.12
31768--31814
23
2.1
23
84
7
62
51
12
4
31
1.59
41074--41116
22
2.0
22
85
0
59
11
11
4
72
1.27
41096--41143
14
3.4
14
74
5
51
16
6
4
72
1.20
45931--45974
22
2.0
22
95
0
79
34
4
36
25
1.76
48840--48892
23
2.4
22
76
20
56
9
18
1
69
1.25
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
48849--48943
21
4.7
21
70
21
60
10
24
1
64
1.32
48914--48949
17
2.1
18
89
5
56
5
22
0
72
1.05
51433--51485
23
2.4
22
76
20
56
9
18
1
69
1.25
53163--53209
22
2.1
22
96
0
85
23
40
4
31
1.74
55732--55779
17
2.8
17
80
0
60
77
4
10
8
1.12
59410--59445
18
2.0
18
89
10
56
44
33
11
11
1.75
63272--63300
12
2.3
13
94
5
51
24
0
0
75
0.80

Tables:   1

The End!