Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold906
Parameters: 2 7 7 80 10 50 1000
Length:  40657

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
674--726
21
2.5
21
84
6
72
32
3
26
37
1.74
1500--1592
35
2.7
35
91
3
152
38
19
16
25
1.92
8235--8424
40
4.8
40
88
0
245
19
27
18
34
1.95
8273--8375
20
5.2
20
64
9
57
17
29
19
33
1.95
8332--8395
20
3.2
20
70
16
69
18
32
12
35
1.89
15131--15161
16
1.9
16
93
0
53
19
41
22
16
1.89
15893--15926
12
2.9
11
91
8
50
70
0
8
20
1.13
15947--15975
5
5.8
5
100
0
58
82
0
0
17
0.66
16646--16855
40
5.2
40
83
4
210
32
19
4
43
1.72
16620--16769
80
1.9
79
83
8
196
35
18
4
41
1.72
16754--16873
41
3.0
41
84
8
122
30
20
5
45
1.72
19130--19315
50
3.7
50
88
0
264
20
30
22
26
1.98
26176--26418
50
4.8
50
85
0
297
23
29
21
25
1.99
31970--32348
47
8.1
47
95
0
625
31
9
30
28
1.88
34355--34500
43
3.4
43
100
0
292
22
15
35
26
1.94
34482--34555
29
2.6
29
89
4
105
25
16
32
25
1.96
34866--35061
40
4.9
40
81
5
184
26
22
27
24
2.00
34866--35062
80
2.5
81
82
5
222
25
22
26
24
2.00
38458--38743
47
6.1
47
94
0
464
30
9
31
27
1.88

Tables:   1

The End!