Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold53
Parameters: 2 7 7 80 10 50 1000
Length:  660679

Tables:   1   2   3   

This is table  3  of  3  ( 248 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
624787--625031
120
2.1
118
86
4
332
26
20
27
25
1.99
624734--624998
40
6.7
40
88
4
349
24
21
27
25
2.00
631455--631574
56
2.1
56
98
0
231
45
9
23
22
1.81
632703--632967
40
6.7
40
88
4
349
24
21
27
26
1.99
651826--651928
52
2.0
52
96
0
188
37
31
15
15
1.89
655000--655125
40
3.2
40
97
0
234
30
29
18
22
1.97
656653--656749
48
2.0
48
100
0
194
46
18
12
22
1.82
658916--658969
26
2.1
26
85
0
72
33
12
16
37
1.87

Tables:   1   2   3

The End!