Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold_3905
Parameters: 2 7 7 80 10 50 1000
Length:  16726

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8321--8531
43
5.0
41
86
4
287
32
20
21
25
1.98
8321--8531
42
5.0
42
87
1
296
32
20
21
25
1.98
8529--8561
16
2.1
16
94
0
57
24
30
12
33
1.91
8856--8901
19
2.4
19
100
0
92
19
8
21
50
1.75
14494--14759
9
30.8
9
71
15
204
32
1
20
45
1.62
14483--14788
25
12.1
25
72
18
170
32
2
20
45
1.65
14498--14654
67
2.5
61
78
11
145
33
2
20
43
1.65
14483--14788
70
4.4
70
71
15
195
32
2
20
45
1.65
14636--14789
79
1.9
77
82
12
188
29
2
20
46
1.64
14623--14788
88
1.9
87
81
7
201
30
2
21
46
1.64
14866--14914
16
3.4
16
68
26
54
32
2
18
46
1.60
14864--14931
27
2.4
28
90
4
111
33
2
16
47
1.62
15084--15144
28
2.1
29
82
8
72
42
1
11
44
1.50
15166--15268
13
7.8
13
77
9
93
46
3
8
40
1.53
15113--15268
26
5.8
26
68
18
95
46
3
9
40
1.52
16189--16220
15
2.1
15
94
0
55
53
15
3
28
1.57

Tables:   1

The End!