Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold465
Parameters: 2 7 7 80 10 50 1000
Length:  192513

Tables:   1   2   

This is table  2  of  2  ( 140 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
174450--174509
7
9.0
7
78
21
58
73
0
26
0
0.84
174460--174514
27
2.0
28
82
10
69
69
0
30
0
0.89
176624--177001
176
2.1
176
90
0
596
28
17
25
29
1.97
176016--176824
132
6.1
132
93
1
1219
29
17
24
28
1.98
176759--177171
132
3.1
127
84
7
479
29
17
24
28
1.97
176492--177133
308
2.1
308
89
1
957
28
17
24
29
1.97
176360--177166
440
1.8
440
90
1
1287
28
17
24
29
1.97
176801--177187
132
2.9
132
89
1
562
29
17
24
28
1.97
178615--178653
19
2.1
19
95
0
69
41
5
2
51
1.38
178755--178788
16
2.1
16
88
0
50
35
8
2
52
1.47
179377--179415
19
2.1
19
95
0
69
41
5
2
51
1.38
180951--181129
89
2.0
90
98
1
351
34
10
11
44
1.74
183266--183299
9
3.8
9
85
14
52
79
0
0
20
0.73
185379--185422
18
2.4
18
92
3
70
40
13
2
43
1.57
185964--186241
113
2.5
112
77
8
278
34
20
19
25
1.96
186747--186780
14
2.3
15
90
5
52
29
0
17
52
1.45
187164--187197
9
3.8
9
85
14
52
79
0
0
20
0.73
187297--187339
22
2.0
22
90
0
68
67
0
0
32
0.91
190785--190826
18
2.3
18
84
8
50
26
4
14
54
1.59
191800--191852
3
17.7
3
100
0
106
66
0
0
33
0.92

Tables:   1   2

The End!