Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold234
Parameters: 2 7 7 80 10 50 1000
Length:  732544

Tables:   1   2   3   

This is table  3  of  3  ( 268 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
666482--666523
6
7.0
6
88
0
57
16
23
0
59
1.37
666482--666524
12
3.6
12
87
0
68
16
25
0
58
1.38
666482--666524
18
2.4
18
96
0
77
16
25
0
58
1.38
669922--669968
25
1.9
25
82
4
60
14
23
21
40
1.90
670043--670114
26
2.8
25
72
12
74
16
23
23
36
1.94
670074--670157
24
3.5
24
66
19
57
16
20
21
41
1.90
677293--677357
27
2.5
26
82
7
78
16
26
21
35
1.95
677385--677443
25
2.4
24
77
8
64
20
25
16
37
1.93
680169--680241
40
1.9
37
84
13
96
15
27
21
35
1.93
683378--683462
38
2.2
38
81
8
93
32
23
22
21
1.98
689969--690036
35
1.9
35
82
11
86
27
23
17
30
1.97
693794--693899
30
3.5
30
92
2
169
42
0
22
33
1.60
695279--695387
41
2.7
41
85
2
148
23
27
19
29
1.98
697120--697186
33
2.0
33
100
0
134
19
17
11
50
1.77
697113--697191
33
2.3
35
84
13
117
20
18
11
49
1.78
698028--698067
20
2.0
20
90
0
62
30
10
10
50
1.69
698013--698079
34
1.9
35
87
3
100
32
8
11
46
1.72
700654--700684
13
2.4
13
94
0
53
35
0
58
6
1.24
700676--700710
18
1.9
18
88
0
52
48
0
51
0
1.00
709988--710034
19
2.4
20
86
13
71
57
0
6
36
1.24
710301--710373
20
3.8
20
71
20
57
56
1
5
36
1.31
713462--713638
91
1.9
91
82
0
219
25
22
29
22
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
724215--724386
51
3.4
51
95
0
308
33
15
21
29
1.94
725691--725740
21
2.5
20
81
15
59
40
6
10
44
1.63
729334--729371
18
2.1
19
90
5
60
42
0
13
44
1.43
729510--729548
16
2.6
15
88
11
62
76
5
0
17
0.96
731918--731986
35
2.0
35
88
0
102
56
0
2
40
1.14
732117--732156
20
2.1
19
86
9
55
50
5
0
45
1.23

Tables:   1   2   3

The End!