Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold352
Parameters: 2 7 7 80 10 50 1000
Length:  458127

Tables:   1   2   

This is table  2  of  2  ( 139 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
415222--415421
82
2.4
81
80
4
213
23
19
28
29
1.98
415227--415422
41
4.8
41
83
1
180
23
18
27
30
1.98
416025--416097
33
2.2
33
92
0
119
16
5
46
31
1.70
416139--416178
7
5.6
7
84
3
53
7
0
52
40
1.30
416948--416995
21
2.3
21
85
7
62
22
52
2
22
1.58
416949--416995
22
2.2
21
84
3
58
23
53
2
21
1.57
421416--421536
43
2.8
43
84
1
143
25
17
29
27
1.97
421909--421960
26
2.0
26
100
0
104
42
7
11
38
1.70
436730--437410
44
15.6
44
70
10
312
29
20
22
26
1.99
436716--437410
218
3.2
216
89
3
1018
29
20
22
26
1.98
441288--441339
26
2.0
26
96
0
95
44
7
9
38
1.66
446275--446505
51
4.6
50
78
5
232
30
26
17
25
1.97
446319--446554
50
4.7
50
78
6
233
30
27
17
25
1.97
446279--446554
152
1.8
152
90
1
446
30
26
18
25
1.98
446330--446564
101
2.3
101
83
4
269
30
27
17
25
1.97
449297--449396
47
2.2
44
83
11
116
29
24
15
32
1.95
449324--449415
47
1.9
47
84
2
121
31
26
16
26
1.96
453729--453780
26
2.0
26
92
0
86
46
7
9
36
1.66
455742--455793
26
2.0
26
92
0
86
44
5
9
40
1.61

Tables:   1   2

The End!