Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold419
Parameters: 2 7 7 80 10 50 1000
Length:  303202

Tables:   1   2   

This is table  2  of  2  ( 138 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
257409--257479
20
3.6
20
71
3
63
54
9
18
16
1.69
257403--257480
39
2.0
39
94
0
138
52
8
19
19
1.71
257402--257460
19
3.1
19
70
4
64
54
6
20
18
1.66
258568--258633
20
3.3
20
72
4
71
54
9
16
19
1.68
258557--258638
39
2.1
39
97
0
155
52
7
19
20
1.70
258556--258614
19
3.1
19
70
4
64
54
6
20
18
1.66
258715--258756
16
2.5
17
85
14
52
69
7
11
11
1.37
258820--258861
3
14.7
3
85
9
61
26
0
0
73
0.83
258812--258863
12
4.6
11
79
11
61
23
0
0
76
0.78
272377--272445
34
2.1
34
84
7
90
50
4
0
44
1.21
273482--273532
16
2.8
19
80
14
63
56
0
3
39
1.18
276321--276356
8
4.5
8
86
13
56
75
0
0
25
0.81
278523--278578
26
2.2
26
80
6
60
23
32
28
16
1.96
284715--284754
20
2.0
20
100
0
80
45
15
20
20
1.86
287230--287279
16
3.3
15
79
17
50
78
2
6
14
1.03
288944--288968
5
5.0
5
100
0
50
20
0
20
60
1.37
290662--290700
19
2.0
21
90
10
64
23
12
10
53
1.69
299646--299786
51
2.8
50
84
3
176
29
17
21
31
1.96

Tables:   1   2

The End!