Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold944
Parameters: 2 7 7 80 10 50 1000
Length:  3963

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--742
132
5.6
131
83
4
895
32
18
21
27
1.96
705--774
32
2.2
32
94
0
122
32
24
14
28
1.94
574--906
164
2.0
163
86
5
467
30
19
19
29
1.97
737--3045
132
17.3
132
85
6
2773
30
17
23
28
1.97
737--3045
264
8.7
264
88
4
3090
30
17
23
28
1.97
1481--1521
19
2.2
19
100
0
82
29
9
39
21
1.86
1349--1646
151
2.0
151
98
0
578
29
16
25
28
1.97
737--3045
396
5.8
396
88
5
3128
30
17
23
28
1.97
2947--3397
88
5.1
88
95
2
766
31
18
23
26
1.97
737--3309
396
6.4
394
85
6
2753
30
17
23
28
1.97
3295--3963
132
5.1
132
87
1
912
31
17
22
27
1.97
3127--3661
220
2.4
217
71
16
531
31
17
23
27
1.97

Tables:   1

The End!