Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold298
Parameters: 2 7 7 80 10 50 1000
Length:  553964

Tables:   1   2   

This is table  2  of  2  ( 139 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
501895--501951
19
2.9
19
86
2
78
33
0
14
52
1.41
501922--501978
27
2.1
27
93
0
96
36
0
14
49
1.43
502302--502353
27
1.9
27
92
0
86
23
38
21
17
1.93
503370--503411
16
2.6
16
88
0
57
42
2
33
21
1.66
503382--503418
16
2.3
16
95
0
65
40
0
32
27
1.57
503632--503673
15
2.7
16
82
14
52
52
2
0
45
1.13
503641--503682
15
2.9
15
82
10
52
52
0
0
47
1.00
505337--506491
76
15.2
76
100
0
2310
23
19
17
39
1.92
511034--511096
27
2.3
27
89
5
92
22
33
15
28
1.95
512332--512378
24
2.0
24
95
0
85
21
12
23
42
1.87
516406--516441
6
5.8
6
96
3
63
80
0
2
16
0.83
516387--516561
86
2.0
88
97
2
336
48
9
4
38
1.54
516492--516527
6
5.8
6
96
3
63
80
0
2
16
0.83
519317--519352
3
12.0
3
100
0
72
0
33
0
66
0.92
523784--523840
23
2.5
23
77
2
62
36
7
7
49
1.57
528269--528311
19
2.3
18
80
7
50
25
2
4
67
1.22
528283--528320
19
2.0
19
89
0
58
26
0
5
68
1.11
532079--532120
22
1.9
22
90
9
68
38
0
0
61
0.96
548034--548058
12
2.1
12
100
0
50
20
16
32
32
1.94

Tables:   1   2

The End!