Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold440
Parameters: 2 7 7 80 10 50 1000
Length:  457504

Tables:   1   2   

This is table  2  of  2  ( 153 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
374226--374325
19
5.3
19
93
0
164
40
7
12
41
1.69
374630--374676
21
2.2
21
85
7
60
27
8
0
63
1.23
374841--374889
23
2.2
21
75
10
53
38
0
4
57
1.18
374879--374929
18
2.8
18
75
3
57
33
3
7
54
1.47
375182--375213
10
2.8
12
86
13
50
46
0
0
53
1.00
379862--379904
7
6.1
7
86
0
50
30
37
2
30
1.70
379869--379985
7
16.7
7
82
0
99
23
29
6
40
1.80
382058--382100
21
2.0
21
100
0
86
18
25
18
37
1.94
386969--387013
12
3.5
14
82
14
53
28
0
0
71
0.87
386975--387013
12
3.4
11
89
10
60
28
0
0
71
0.86
395398--395484
30
2.8
30
77
5
93
52
12
11
22
1.71
398348--398424
40
1.9
39
84
7
102
38
6
3
50
1.47
398363--398430
17
3.9
18
69
16
54
38
5
5
50
1.51
398932--399116
92
2.0
93
98
1
363
47
7
5
39
1.55
403016--403195
20
9.0
20
64
7
69
35
14
30
20
1.92
402999--403237
40
6.0
40
88
0
334
35
15
29
19
1.93
409994--410282
40
7.2
40
83
0
335
37
19
25
17
1.93
413922--413952
2
16.0
2
93
6
55
48
0
0
51
1.00
420525--420691
55
3.0
55
100
0
334
23
23
17
34
1.96
426449--426499
25
2.0
26
84
3
68
37
11
11
39
1.79
426608--426647
21
1.9
21
89
0
62
55
0
0
45
0.99
429330--429370
14
2.9
14
85
0
55
31
0
0
68
0.90
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
438836--438889
22
2.5
20
77
13
54
59
12
1
25
1.44
440354--440626
132
2.1
133
92
0
449
27
26
19
27
1.99
440718--441196
44
10.9
44
65
12
232
27
25
19
27
1.99
440717--441265
132
4.2
132
97
0
1019
27
25
19
26
1.99
440717--441329
264
2.3
264
93
1
1025
27
25
19
27
1.99
441400--442111
89
8.0
89
92
1
1038
22
25
26
26
2.00
441400--442111
177
4.0
177
89
2
1034
22
25
26
26
2.00
441400--442111
266
2.7
265
89
0
1075
22
25
26
26
2.00
448530--448574
18
2.5
18
85
7
56
33
0
0
66
0.92
449876--449982
45
2.4
45
85
3
135
39
19
19
21
1.93
452742--452778
13
2.8
14
88
8
51
43
0
0
56
0.99

Tables:   1   2

The End!