Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold433
Parameters: 2 7 7 80 10 50 1000
Length:  252396

Tables:   1   2   

This is table  2  of  2  ( 148 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
225184--225376
41
4.7
41
83
6
149
20
25
25
29
1.99
225227--225397
82
2.1
82
84
4
220
24
25
23
26
2.00
226559--226731
74
2.4
74
91
1
267
27
17
20
34
1.95
227891--227921
16
1.9
16
93
0
53
35
25
6
32
1.82
229826--229867
16
2.7
15
85
7
66
45
14
0
40
1.45
235416--235598
87
2.1
87
94
0
321
36
17
34
12
1.87
235554--235644
21
4.3
21
90
0
74
32
14
43
8
1.76
235949--236341
43
9.1
43
93
0
624
22
20
27
29
1.99
237044--237091
18
2.7
18
96
0
87
35
12
12
39
1.81
237521--237759
72
3.3
71
87
4
338
25
7
14
53
1.65
238868--238910
21
2.0
21
100
0
86
37
4
27
30
1.77
239786--239823
13
2.9
13
84
0
58
34
26
7
31
1.85
242230--242274
23
2.0
23
90
0
72
28
6
22
42
1.79
243762--244048
50
5.6
50
76
7
224
22
29
20
26
1.99
246934--246977
23
1.9
23
90
0
70
25
4
25
45
1.72
247903--248136
108
2.2
108
96
1
427
44
8
2
44
1.48
248022--248073
21
2.5
21
87
0
68
44
3
0
51
1.19
248162--248233
9
8.0
9
78
6
65
48
18
0
33
1.48
248288--248458
9
18.8
9
73
14
120
46
17
1
35
1.56
248305--248446
38
3.6
39
88
6
189
47
16
1
34
1.56
248330--248584
43
5.9
43
73
12
184
48
14
2
34
1.57
248352--248670
137
2.3
136
94
1
523
48
14
3
33
1.59
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
248491--248595
9
11.7
9
69
17
58
47
14
1
36
1.55
250405--250465
19
2.9
21
83
11
72
37
8
16
37
1.78
250418--250475
22
2.7
23
78
7
59
37
5
15
41
1.70
250662--250706
23
2.0
23
81
0
54
22
0
15
62
1.33
250943--250974
3
10.7
3
100
0
64
34
0
0
65
0.93
251236--251442
3
69.0
3
100
0
414
33
0
0
66
0.92

Tables:   1   2

The End!