Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold_438 ID=scaffold_438-JGI_221_v2.0
Parameters: 2 7 7 80 10 50 1000
Length:  9267

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--1543
88
17.5
88
87
2
2170
24
25
23
26
2.00
244--469
44
5.1
43
65
14
120
24
25
23
26
2.00
718--1471
44
17.2
44
62
16
161
24
24
23
27
2.00
3722--3861
44
3.2
44
66
11
115
21
21
25
32
1.98
3645--8981
88
60.6
88
86
1
6373
23
23
23
25
1.98
6453--6593
45
3.2
45
67
18
114
20
24
22
31
1.98
6410--6547
44
3.2
42
68
19
111
22
24
23
28
1.99
6717--6860
44
3.2
44
67
11
123
25
21
22
29
1.99
9088--9240
22
7.0
22
90
0
225
32
14
26
26
1.94

Tables:   1

The End!