Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold_831 ID=scaffold_831-JGI_221_v2.0
Parameters: 2 7 7 80 10 50 1000
Length:  5685

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--1495
132
11.3
132
89
2
2212
25
24
19
31
1.98
293--646
44
8.0
44
63
10
123
26
24
18
30
1.98
952--1404
44
10.2
44
63
15
126
24
23
20
31
1.98
1915--2751
132
6.4
132
93
1
1378
25
24
18
31
1.98
2142--2730
44
13.4
43
63
14
193
26
23
17
31
1.97
4675--5685
132
7.7
132
91
0
1621
25
23
18
31
1.97
4783--5625
44
19.2
44
62
14
159
25
23
18
32
1.97
4675--5685
395
2.6
396
94
0
1756
25
23
18
31
1.97
4675--5685
527
1.9
527
91
0
1646
25
23
18
31
1.97

Tables:   1

The End!