Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018398295.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1599.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15169

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1020--2453
171
8.4
171
74
4
890
33
14
12
35
1.84
1312--2453
341
3.3
339
78
4
1082
34
14
12
36
1.83
2809--3133
171
1.9
171
85
1
445
33
14
13
38
1.85
5234--6269
171
6.2
168
77
8
950
34
15
13
36
1.86
5486--6139
325
2.0
326
81
5
779
34
15
13
36
1.87
5321--6251
496
1.9
497
82
4
1182
35
15
13
36
1.86
6203--6242
21
1.9
21
89
0
62
45
15
12
27
1.82
7082--7119
18
2.1
18
95
0
67
47
18
7
26
1.76
7914--7992
38
2.1
39
97
2
151
32
7
7
51
1.58
8003--10592
171
15.1
171
78
4
2365
34
15
12
36
1.85
13763--14820
171
6.2
167
78
8
979
36
12
12
38
1.81
13763--14820
341
3.1
335
83
5
1232
36
12
12
38
1.81
13763--14833
343
3.1
338
82
5
1253
36
12
11
39
1.80
14579--15124
291
1.9
291
83
3
713
34
12
11
41
1.79

Tables:   1

The End!