Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018398308.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_161.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25590

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5987--6359
170
2.2
171
81
5
425
34
14
10
40
1.80
6065--6403
170
2.0
171
84
2
450
34
14
12
39
1.83
9012--9053
21
2.0
20
86
9
57
45
9
16
28
1.79
9805--10445
170
3.8
169
76
5
506
38
11
12
35
1.81
11655--12343
171
4.0
169
76
7
576
34
15
11
35
1.84
11655--12343
170
4.0
170
77
5
602
34
15
11
35
1.84
14647--15245
170
3.5
169
76
3
470
33
11
12
36
1.80
23769--24077
170
1.9
160
85
4
345
33
13
12
36
1.83

Tables:   1

The End!