Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018398318.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1619.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4650

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
947--1687
171
4.3
170
81
4
778
32
12
13
39
1.82
1709--3661
171
11.4
171
71
6
583
34
13
11
36
1.81
2210--3661
343
4.2
339
75
6
1045
35
13
11
36
1.82
2210--3994
171
10.4
171
73
7
1025
35
13
11
36
1.81
3078--3793
343
2.1
342
79
2
758
36
13
11
37
1.81
4412--4650
120
2.0
121
82
4
295
34
16
15
33
1.91

Tables:   1

The End!