Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397363.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_169.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39454

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
284--690
171
2.4
168
79
7
418
36
15
11
36
1.84
1223--2060
171
4.9
166
74
9
462
34
12
13
39
1.82
1282--2066
342
2.3
342
79
5
829
34
12
13
39
1.82
2738--12612
171
57.8
169
77
8
7011
34
13
12
39
1.82
2738--12612
512
19.3
509
77
7
7428
34
13
12
39
1.82
6521--6565
22
2.0
22
86
0
63
40
0
4
55
1.20
14564--15178
171
3.6
170
78
3
635
35
12
11
40
1.79
15608--28198
171
73.8
170
74
7
7520
35
13
12
39
1.82
15680--28198
341
36.7
340
75
7
7394
35
13
12
39
1.82
32663--32694
16
1.9
17
93
6
57
0
40
0
59
0.97
34477--39454
171
29.1
170
73
7
2588
34
13
12
38
1.82
34493--39454
340
14.5
340
74
7
2979
34
13
12
38
1.82
38378--39421
170
6.1
169
76
7
691
36
13
10
39
1.79

Tables:   1

The End!