Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018398361.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1659.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10394

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
117--1573
171
8.5
172
73
8
712
34
13
10
37
1.79
2378--3031
171
3.8
170
79
5
487
34
14
11
34
1.82
3989--5699
171
10.0
171
75
5
995
35
13
10
36
1.80
3989--4998
512
2.0
501
79
4
1032
35
13
10
36
1.81
4231--5699
341
4.3
331
73
11
696
35
13
10
36
1.80
5885--8955
171
18.0
170
71
5
1625
34
13
10
36
1.80
9273--10394
171
6.6
170
77
5
858
35
13
11
37
1.81
9415--10302
341
2.6
341
78
4
941
35
14
10
38
1.81

Tables:   1

The End!