Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397366.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_641.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37046

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15955--16767
171
4.8
170
77
8
731
40
12
13
34
1.81
15955--16761
342
2.4
339
79
7
851
40
11
13
34
1.81
16806--17206
162
2.4
162
80
6
432
36
11
15
35
1.85
17719--19717
171
11.7
170
76
8
1213
39
11
13
34
1.81
17726--19717
512
3.9
503
77
7
1716
39
11
13
34
1.81
17723--19715
342
5.8
337
78
6
1523
39
11
13
34
1.81
20081--20148
32
2.1
32
86
5
93
39
20
23
16
1.91
27452--31284
171
22.5
171
77
6
2856
34
13
11
38
1.81
28227--28270
22
2.0
22
82
8
54
54
6
11
27
1.61
27451--31330
511
7.6
510
77
6
3110
35
13
11
38
1.81
31511--32719
171
7.1
170
79
5
1088
33
12
12
41
1.81
31511--32778
342
3.7
341
82
4
1380
34
12
12
40
1.81
31511--32778
513
2.5
508
80
6
1355
34
12
12
40
1.81
33401--37046
171
21.4
170
78
5
3039
34
13
11
39
1.81

Tables:   1

The End!