Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397371.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1154.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35622

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
836--2407
171
9.2
170
69
8
642
37
11
12
34
1.80
836--2018
342
3.5
340
74
6
815
37
11
13
35
1.81
14117--14545
170
2.6
162
76
8
317
34
12
13
34
1.83
21496--21984
170
2.9
170
78
9
413
37
11
13
36
1.80
23435--24182
171
4.4
171
77
4
657
37
13
14
33
1.86
23435--24172
342
2.2
342
78
6
805
38
13
14
33
1.86
23538--24265
171
4.3
171
75
7
428
39
13
13
33
1.84
25033--28197
171
18.6
171
74
7
1970
34
13
12
37
1.83
25033--28921
342
11.5
338
72
8
1997
34
13
12
37
1.83
25037--27404
853
2.8
852
78
7
2219
34
14
12
38
1.84
33400--34923
170
8.9
171
78
6
1356
36
13
12
38
1.82
33394--34922
342
4.5
336
78
7
1347
36
13
12
38
1.82

Tables:   1

The End!