Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018398484.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_178.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7540

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4--719
171
4.2
169
78
6
653
38
12
14
34
1.83
4--719
342
2.1
341
81
6
833
38
12
14
34
1.83
1211--1779
172
3.3
168
83
4
640
34
13
13
38
1.84
1214--1800
171
3.4
170
83
3
642
34
13
12
39
1.83
2791--3098
171
1.8
171
82
2
395
36
12
12
38
1.81
3834--4825
171
5.8
171
84
2
1188
38
12
14
35
1.83
5459--7027
171
9.2
171
78
5
1275
34
14
11
38
1.83
5455--7027
512
3.1
508
79
6
1670
34
14
11
38
1.83

Tables:   1

The End!