Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018398486.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1781.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11432

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1483--2143
171
3.9
169
77
5
553
32
14
12
37
1.83
2686--3125
172
2.6
170
80
4
495
35
13
12
38
1.82
3312--4045
172
4.3
171
79
3
724
34
15
12
35
1.85
4351--4669
171
1.9
171
82
3
401
37
16
10
35
1.84
5062--6202
171
6.7
168
79
9
1069
35
15
12
36
1.85
5062--6202
172
6.7
170
79
6
1146
35
15
12
36
1.85
5062--6189
517
2.2
514
83
5
1393
35
15
12
36
1.85
6303--8032
171
10.1
170
81
3
1658
34
14
13
37
1.85
8952--9372
171
2.5
170
75
6
418
32
12
17
32
1.87

Tables:   1

The End!