Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397378.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_144.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33900

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9352--10802
171
8.5
169
79
5
1298
38
12
13
34
1.84
9352--10858
341
4.4
340
79
4
1509
38
12
13
34
1.83
9360--10809
512
2.8
509
80
4
1700
38
12
14
34
1.84
11996--12035
21
1.9
21
85
10
55
25
20
10
45
1.81
14324--14363
21
1.9
21
85
10
55
22
20
12
45
1.84
16432--17545
171
6.5
169
72
11
711
35
14
12
37
1.84
16986--17545
170
3.3
171
76
9
475
35
15
11
38
1.83
17655--20961
171
19.3
170
77
5
2474
38
12
13
35
1.82
17786--20902
513
6.1
511
78
5
2833
38
12
13
35
1.82
23842--27251
171
19.9
171
78
5
2720
35
13
12
38
1.82
23838--29744
341
17.4
341
73
7
3480
34
13
12
38
1.81
23842--29741
512
11.6
510
74
7
3809
34
13
12
38
1.81
27350--29744
683
3.5
678
80
5
2255
35
12
12
39
1.81
27350--29744
171
14.0
169
77
6
1928
35
12
12
39
1.81
32179--33568
171
8.2
171
78
6
1213
34
14
11
38
1.83

Tables:   1

The End!