Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018398511.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1804.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3643

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--422
171
2.5
171
83
3
492
34
17
11
34
1.86
1--529
171
3.1
160
77
13
409
34
16
11
33
1.85
655--1320
171
3.9
169
79
3
548
36
13
10
39
1.78
704--1320
341
1.8
342
80
2
756
35
12
9
40
1.77
2112--2444
168
2.0
161
80
13
367
32
14
11
39
1.82
2084--2853
170
4.5
166
75
6
564
33
13
12
36
1.82
3190--3643
171
2.7
171
76
2
457
36
13
11
35
1.80

Tables:   1

The End!