Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018398519.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1811.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16663

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--891
171
5.2
170
73
6
645
35
13
13
35
1.84
1615--1649
14
2.5
14
90
0
52
28
5
40
25
1.78
2313--8257
171
34.9
171
69
8
1094
35
11
13
34
1.80
5364--6251
344
2.6
333
77
10
685
37
11
12
36
1.80
5167--8257
342
9.0
341
73
8
1610
36
11
13
35
1.81
12977--13314
171
2.0
170
82
9
422
39
11
15
33
1.83
14270--14299
15
1.9
16
93
6
53
53
10
6
30
1.60
14770--15320
172
3.2
170
76
1
494
35
13
12
34
1.82
15298--15348
26
2.1
23
86
13
68
19
21
11
47
1.81

Tables:   1

The End!