Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397383.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_781.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32617

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2383--2591
112
1.9
111
81
3
258
36
9
11
43
1.73
2494--7611
172
29.9
172
80
3
4947
35
14
10
38
1.81
2486--7611
343
15.0
343
79
4
5017
35
14
10
38
1.81
13325--13772
173
2.6
173
77
4
413
33
13
13
36
1.84
13441--13772
170
1.9
172
81
4
402
33
13
13
39
1.84
13434--14421
171
5.8
171
73
6
496
34
13
11
36
1.80
16367--17480
172
6.5
170
75
9
889
41
10
14
34
1.80

Tables:   1

The End!