Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018398591.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1882.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7213

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
463--1140
341
2.0
339
81
6
800
39
12
12
34
1.81
458--1144
170
4.0
169
84
5
794
40
12
12
34
1.81
1249--1590
170
2.1
161
73
13
325
38
11
12
34
1.79
1248--2012
171
4.5
170
70
6
429
38
10
12
34
1.79
2592--5301
171
15.9
170
78
5
2316
38
12
14
34
1.84
2592--5301
339
8.0
342
77
6
2357
38
12
14
34
1.84
6009--6379
170
2.2
170
83
4
464
40
11
11
36
1.77
6550--7020
170
2.8
170
79
4
491
39
12
12
33
1.81

Tables:   1

The End!