Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018398608.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1898.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12876

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
908--1169
128
2.0
129
87
3
377
32
11
17
38
1.86
1037--1741
170
4.1
169
73
6
487
36
9
13
34
1.77
1605--1882
141
2.0
140
85
6
377
41
11
10
37
1.75
1740--2321
171
3.4
170
74
5
456
34
12
14
36
1.83
2423--4484
171
11.9
171
70
9
643
35
10
13
33
1.79
3330--4484
171
6.8
170
77
5
1014
36
11
14
34
1.82
3330--4484
340
3.4
341
78
4
1012
36
11
14
34
1.82
3339--4484
511
2.2
502
78
9
1137
36
11
14
34
1.82
5238--5895
171
3.9
168
77
6
612
37
11
14
34
1.83
6388--7265
171
5.1
170
77
4
712
35
11
14
35
1.82
9095--9622
171
3.1
170
74
6
510
34
16
12
35
1.85
11864--12398
171
3.1
169
76
4
493
34
14
11
35
1.82

Tables:   1

The End!