Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018398610.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_19.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5227

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
478--1604
172
6.6
169
72
7
629
33
12
11
38
1.80
1756--2912
171
6.8
168
79
5
986
35
13
12
38
1.83
3123--5227
342
6.1
337
80
4
1969
36
12
12
38
1.81
3123--5227
171
12.3
169
77
5
1738
36
12
12
38
1.81
3123--5226
513
4.1
512
79
5
2040
36
12
12
38
1.81

Tables:   1

The End!