Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397389.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_91.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27943

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2215--2269
7
7.9
7
87
0
83
14
41
0
43
1.45
3165--3569
171
2.4
171
81
2
438
34
13
15
34
1.87
4575--5309
170
4.3
169
78
5
691
38
11
13
35
1.81
4575--5303
339
2.2
340
81
4
830
38
11
13
35
1.81
6727--10399
171
21.6
170
73
5
2074
37
12
13
33
1.83
6067--9169
681
4.5
677
74
4
2208
37
12
13
33
1.83
6067--10399
342
12.8
342
73
5
2646
36
12
13
33
1.84
10505--12556
171
12.0
171
78
3
1591
38
12
12
34
1.81
6067--12554
342
18.9
344
71
8
2278
37
12
13
34
1.83
6067--12556
514
12.6
512
72
7
2631
37
12
13
34
1.83
14735--15964
170
7.2
171
74
6
862
38
10
13
35
1.80
22535--22949
172
2.4
172
78
1
449
40
11
13
32
1.81

Tables:   1

The End!