Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018398631.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1917.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15784

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1736--2620
171
5.2
169
75
5
694
39
11
13
34
1.80
1736--2590
170
5.0
169
76
4
643
40
10
13
34
1.80
3836--4153
171
1.9
161
81
5
302
35
12
15
33
1.85
4055--4381
170
2.0
158
93
1
458
38
12
13
32
1.81
6779--7646
169
5.1
170
76
7
636
38
12
13
33
1.83
9910--10375
171
2.7
168
76
7
447
39
12
13
34
1.82
10403--10710
169
1.8
170
80
4
372
37
14
11
36
1.82
11420--14063
171
15.5
171
77
5
2125
34
13
12
38
1.83
14864--15610
170
4.4
169
75
7
593
40
12
12
34
1.81
14323--15610
171
7.6
169
71
8
662
39
11
12
34
1.79
14836--15601
339
2.3
340
79
5
775
40
12
12
34
1.81
14864--15774
170
5.4
169
75
8
395
39
12
13
34
1.82

Tables:   1

The End!