Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018398639.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1925.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9819

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2361--2710
169
2.1
170
82
8
421
37
12
16
33
1.86
2029--2710
339
2.0
340
79
3
737
37
12
14
33
1.84
2889--3771
171
5.2
170
72
7
420
39
11
13
34
1.81
5451--6170
338
2.1
335
79
5
734
36
13
12
33
1.82
4800--6228
170
8.4
169
72
6
947
36
12
13
33
1.83
6825--7360
171
3.1
169
80
5
492
39
11
13
36
1.80
7295--7425
65
2.0
64
88
1
190
47
10
9
32
1.70
7360--8790
171
8.4
170
75
5
1136
37
12
13
34
1.82
7376--8794
514
2.8
506
75
7
1315
37
12
13
34
1.82
8725--8859
65
2.1
66
87
4
193
45
11
8
33
1.72
9410--9797
180
2.2
170
94
0
490
36
12
14
31
1.83

Tables:   1

The End!