Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397392.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_928.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27647

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5--5216
170
30.7
168
71
9
1392
38
12
13
34
1.82
5--5216
341
15.4
339
71
11
1614
38
12
13
34
1.82
1073--17363
171
95.0
171
70
9
5866
38
12
13
33
1.82
7075--7105
15
2.1
15
100
0
62
41
12
6
38
1.69
7308--8005
338
2.1
341
82
5
842
39
13
13
33
1.84
8512--8563
21
2.5
20
87
9
77
25
19
9
46
1.80
8616--16688
512
15.8
507
74
7
3530
38
12
13
33
1.82
12612--12650
21
1.9
21
89
5
62
28
12
12
46
1.79
9359--17363
341
23.5
337
72
8
2200
38
11
13
33
1.82
20452--27647
171
42.5
170
74
6
4403
33
14
12
38
1.83
20452--27647
341
21.2
339
75
6
4410
33
14
12
38
1.83
20838--25631
510
9.4
512
76
7
2143
33
14
11
38
1.83
26490--26789
159
1.9
159
82
4
381
35
14
12
39
1.82

Tables:   1

The End!