Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397393.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2062.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26646

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
951--1432
170
2.8
166
80
6
477
39
12
13
34
1.82
2939--8150
344
15.2
343
76
5
3534
39
11
12
34
1.80
2935--8150
171
30.5
170
74
6
3441
39
11
12
34
1.80
11135--13806
171
15.7
171
76
7
2089
38
12
12
35
1.80
12911--13806
343
2.6
337
80
8
965
39
10
13
36
1.80
15377--15755
171
2.2
171
80
1
402
37
10
12
36
1.77
16155--17307
171
6.7
168
74
6
832
37
11
13
35
1.81
16529--17309
341
2.3
341
81
5
871
37
11
13
36
1.81
17410--19923
171
14.6
171
74
7
1632
35
12
11
37
1.79
20559--20604
21
2.2
20
81
7
56
69
2
26
2
1.11
26528--26575
22
2.2
22
96
0
87
33
14
22
29
1.94

Tables:   1

The End!