Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018398662.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1947.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14885

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
907--2175
171
7.4
170
76
8
1005
37
12
14
35
1.84
907--2175
342
3.7
341
83
3
1484
37
12
14
35
1.84
2390--3744
171
7.9
169
77
8
1138
38
11
14
35
1.82
2390--3744
341
4.0
341
85
4
1716
38
11
14
35
1.82
3860--4522
171
3.9
168
77
5
607
38
12
13
34
1.84
3860--4522
342
1.9
342
83
4
845
38
12
13
34
1.84
6945--9079
342
6.2
342
82
3
2472
35
14
11
38
1.83
6945--9079
171
12.5
171
77
6
1892
35
14
11
38
1.83
6945--9079
511
4.2
514
76
7
1929
35
14
11
38
1.83
9554--10773
171
7.1
170
78
5
1102
35
15
11
37
1.83
9554--10786
342
3.6
343
83
4
1470
35
15
11
37
1.84
12086--13406
171
7.8
170
74
9
999
37
12
14
35
1.83
12000--13466
342
4.3
341
82
3
1817
37
12
14
35
1.84

Tables:   1

The End!