Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397399.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_925.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25184

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--635
172
3.7
171
76
8
516
34
11
16
37
1.84
1476--4850
172
19.7
171
78
4
3036
36
14
12
36
1.84
4952--5736
172
4.6
171
80
4
618
35
13
13
36
1.84
5735--6539
171
4.7
169
75
8
644
35
14
11
38
1.83
5773--6539
342
2.2
341
80
5
816
35
13
11
38
1.82
6738--7490
171
4.4
169
72
6
469
35
13
11
35
1.81
8536--9389
341
2.5
341
79
1
832
36
12
11
34
1.81
9538--11055
172
9.0
171
78
8
1132
36
12
14
36
1.85
9539--11055
343
4.5
342
73
9
935
36
12
14
36
1.85
10514--10559
23
2.0
23
100
0
92
43
8
17
30
1.79
11680--12008
171
2.0
161
78
7
336
36
12
13
34
1.83
22076--22576
172
2.9
170
80
6
462
35
14
12
35
1.83
22229--22538
171
1.8
172
83
4
412
36
13
13
36
1.85
22227--22576
171
2.0
171
80
5
404
36
13
14
36
1.84

Tables:   1

The End!