Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018398714.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2.1, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9139

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--2446
171
14.4
171
76
4
1944
35
12
12
40
1.81
3--2446
343
7.2
341
77
6
1438
35
12
12
40
1.81
2229--2688
242
1.9
241
85
2
636
34
13
11
41
1.79
2453--5080
171
15.4
170
75
7
1673
34
12
12
39
1.82
5105--5489
171
2.3
170
88
2
567
32
11
12
43
1.78
4681--5563
412
2.1
413
87
2
1258
32
13
12
41
1.82
5450--5705
71
3.6
71
91
2
397
32
18
8
40
1.81
6825--7140
170
1.9
159
76
14
295
35
14
12
35
1.83
7115--7838
171
4.2
170
77
5
533
33
14
13
38
1.85
7761--7914
76
2.0
76
91
2
247
31
16
14
38
1.88
8019--8787
171
4.5
170
74
7
486
35
13
12
38
1.82
7433--8256
418
2.0
418
82
3
998
34
13
13
38
1.84

Tables:   1

The End!