Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018398737.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_202.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32204

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
180--1125
171
5.5
169
71
10
454
34
13
10
36
1.80
1526--2577
170
6.2
169
76
5
870
34
13
10
37
1.80
2732--3145
171
2.4
170
82
1
497
36
15
10
35
1.82
4570--5212
170
3.8
169
74
5
481
35
13
10
37
1.80
5633--6221
170
3.5
166
76
4
446
34
13
11
37
1.81
5657--5984
168
2.0
159
83
4
331
32
13
11
39
1.81
6446--6758
168
1.9
160
78
8
326
33
12
15
34
1.86
6322--8823
171
14.7
170
76
4
1439
36
11
13
34
1.81
6620--8540
513
3.8
508
77
6
1614
36
11
13
34
1.81
6446--8823
341
7.0
338
75
6
1631
36
11
13
34
1.81
16134--17208
170
6.3
168
73
8
714
38
9
13
35
1.78
16172--16843
343
2.0
343
82
5
838
38
9
13
36
1.78
17439--17759
169
1.9
171
82
5
409
38
11
14
35
1.82
18100--18655
168
3.3
168
76
8
420
40
10
13
33
1.79
23669--23973
167
1.8
170
87
3
456
42
8
14
34
1.77
24633--25217
171
3.4
170
76
4
514
37
10
14
33
1.80
27029--27555
170
3.1
170
75
4
397
34
13
10
37
1.79
30143--30561
170
2.5
161
79
9
381
33
11
10
38
1.77
30627--31180
171
3.2
170
76
5
429
33
13
10
40
1.79

Tables:   1

The End!