Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397404.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_237.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23391

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
231--689
169
2.7
169
81
4
496
37
11
16
33
1.85
231--6686
171
37.8
170
75
6
4264
38
12
13
34
1.82
6565--6800
114
2.1
114
80
7
257
32
12
17
37
1.88
6791--7053
139
1.9
138
85
5
361
44
11
11
33
1.76
6927--9029
171
12.3
171
77
5
1802
38
12
14
34
1.83
12294--13679
171
8.1
171
79
3
1243
37
13
14
34
1.84
12320--13713
342
4.1
343
79
5
1411
38
13
14
34
1.84
12323--13719
514
2.7
511
82
4
1625
38
13
14
34
1.84
16907--18199
171
7.6
171
76
6
1045
34
13
12
39
1.82
16907--18094
504
2.3
503
78
6
1218
34
13
12
39
1.83
21691--23280
171
9.3
169
77
6
1332
34
14
12
39
1.83
21691--23280
512
3.1
508
80
4
1653
34
14
12
39
1.83

Tables:   1

The End!